Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948811.1_cds_XP_016489977.1_80446
CDS Infomation

[gene=LOC107809801] [db_xref=GeneID:107809801] [protein=dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like] [protein_id=XP_016489977.1] [location=complement(join(24221..24377,24792..24901,25168..25354,25444..25556,26236..26406,26520..26783,27581..27877))] [gbkey=CDS]
Sequence

ATGGCGTCACTTGGGTTGGCTCAACGAATCAGAATTGGACTTGATGGTAACTCGGGTGCT
GAATTCCCTATGATGGGTCGGCCCCGTAGGTCCTTGAGCTCGAATTACGGTAGAAGCCGA
GTTGGGTTCAGAATTATGGCCTCAGAGGGTCAGTCTGTGGAGCCCGATCTCAGTGTTACT
GTTAACGGTTTGAAAATGCCCAACCCATTCGTCATCGGGTCGGGTCCTCCTGGGACCAAC
TATACAGTGATGAAAAGAGCCTTTGATGAAGGCTGGGGTGGTGTTATCGCCAAAACGGTG
TCTTTGGAAGCCGATAAAGTTAAAAATGTGACCCCAAGATATGCTAAATTAAGAGCAGGA
GCAAATGGTTCTGCCAAAGGACAAATTATCGGGTGGCAGAATATTGAGCTTATAAGTGAT
CGACCTCTGGAAACAATGCTGAAAGAGTTTAGGCAATTGAAAAAAGAATATCCAGATAGG
ATACTTATTGCTTCTATCATGGAAGAGTACAACAAATCTGCTTGGGAGGAACTTATTTAC
AGAGTTGAGGAAACTGGAATTGATGCCATTGAGATCAACTTCTCATGCCCTCATGGTATG
CCAGAACGTAGAATGGGTGCTGCTGTTGGTCAAGATTGCGATCTCTTGGAGGAGGTTTGT
GGCTGGATTAATGCTGTAGCCACAGTTCCAGTTTGGGCAAAGATGACCCCTAATATCACT
GACATTACAAAGCCAGCTAGGGTGTCTCTTGACCAAGGGTGCGAGGGAGTATCTGCCATA
AATACAATCATGAGTGTTATGGGAATCAATCTTAACACCTTAAGGCCCGAGCCTTGTGTT
GAGGGATACTCTACTCCTGGAGGCTACTCAGCAAAGGCAGTGCACCCGATTGCGCTTGCA
AAAGTAATGAACATTGCACAGATGATGAAGTCAGAATTTGGACATAAGGACTATTCACTC
TCTGCTATTGGGGGAGTCGAGACAGGTGGTGATGCCGCTGAGTTTATTCTTCTCGGAGCA
AATACTGTACAGGTTTGTACCGGTGTCATGATGCATGGATATGGACTTGTCAAAACATTG
TGCTCTGAGCTGAAAGATTTCATGAGAAAGCACAATTTTTCATCAATAGAAGATTTTAGG
GGGTCGTCACTTGAGTACTTCACAACCCACACGGATTTGGTTAAAAGGCAGCAAGAAGCA
ATACGCCAAAGGAAAGCCATTAAGAAAGGTTTACAATCTGACAAAGACTGGACAGGAGAT
GGTTTTGTGCAAGAAACTGAAAGCATGGTTTCCAACTAG

Peptide Sequence

PEP ID

XP_016489977.1
PEP Infomation

PREDICTED: dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [Nicotiana tabacum]
Sequence

MASLGLAQRIRIGLDGNSGAEFPMMGRPRRSLSSNYGRSRVGFRIMASEGQSVEPDLSVT
VNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLEADKVKNVTPRYAKLRAG
ANGSAKGQIIGWQNIELISDRPLETMLKEFRQLKKEYPDRILIASIMEEYNKSAWEELIY
RVEETGIDAIEINFSCPHGMPERRMGAAVGQDCDLLEEVCGWINAVATVPVWAKMTPNIT
DITKPARVSLDQGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALA
KVMNIAQMMKSEFGHKDYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKTL
CSELKDFMRKHNFSSIEDFRGSSLEYFTTHTDLVKRQQEAIRQRKAIKKGLQSDKDWTGD
GFVQETESMVSN

Transcript Sequence

Gene sequence data has not been registered.